OpenVariant documentation#
OpenVariant is a comprehensive Python package that provides different functionalities to read, parse and operate
different multiple input file formats (e. g. tsv, csv, vcf, maf, bed), being able to customize the output.
These docs will guide you through the installation, different methods and some practical examples. For more information, check our GitHub repository.
References#
Please reference the following when using OpenVariant:
- 2024:Martínez-Millán
David Martínez-Millán, Federica Brando, Miguel L. Grau, Mònica Sánchez-Guixé, Carlos López-Elorduy, Iker Reyes-Salazar, Jordi Deu-Pons, Núria López-Bigas, and Abel González-Pérez. OpenVariant: a toolkit to parse and operate multiple input file formats. Bioinformatics, 2024. doi:10.1093/bioinformatics/btae714.